BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008D06SP1|AL425852
(799 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1574 726 0.0
3x_Contig619 367 e-101
>3x_Contig1574
Length = 8021
Score = 726 bits (366), Expect = 0.0
Identities = 369/370 (99%)
Strand = Plus / Plus
Query: 1 actcacctggttattgaagaaaatctggtattcgccatacttgggatcctgtaattcgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7633 actcacctggttattgaagaaaatctggtattcgccatacttgggatcctgtaattcgtg 7692
Query: 61 taataggtcttgaatcgtatcctcagtgggtttcaaatagcataaacatttcaaatgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7693 taataggtcttgaatcgtatcctcagtgggtttcaaatagcataaacatttcaaatgtgg 7752
Query: 121 cattggatctctgtgaatattctcaagtttatcgaccaagtaaatctcgtgctttaatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7753 cattggatctctgtgaatattctcaagtttatcgaccaagtaaatctcgtgctttaatag 7812
Query: 181 ctcggtttgagtagtacacatcgatatcgtagagagtgtgtcattatccaaaatcaatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7813 ctcggtttgagtagtacacatcgatatcgtagagagtgtgtcattatccaaaatcaatgc 7872
Query: 241 ctttactctcgacttctcctgtatcgaggtgtccgacggtttggactggaaatttgcgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7873 ctttactctcgacttctcctgtatcgaggtgtccgacggtttggactggaaatttgcgat 7932
Query: 301 tctgctgatataataatcaccaaccgtaaacaaattcattacgaaaaagtgctctatcct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7933 tctgctgatataataatcaccaaccgtaaacaaattcattacgaaaaagtgctctatccc 7992
Query: 361 ctcaatttca 370
||||||||||
Sbjct: 7993 ctcaatttca 8002
>3x_Contig619
Length = 1987
Score = 367 bits (185), Expect = e-101
Identities = 244/259 (94%), Gaps = 4/259 (1%)
Strand = Plus / Minus
Query: 544 ttgtttaactacaaacaaacacaggaacaacaatcttgctatagcctgtgattccaaact 603
||||||||||||| |||||||||||| || |||||||||||||||||||||||||| |||
Sbjct: 1976 ttgtttaactacatacaaacacaggacca-caatcttgctatagcctgtgattccatact 1918
Query: 604 ttacatttaggtgggaaatagcaatttttccacaattctgtacagtcaaggtaataattc 663
|||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 1917 ttacctttaggtgggaaatagcaccctttccacaattctgtacagtcaaggtcataattc 1858
Query: 664 ttaagttgaggctactggctattctttacaacaatggccacaattt-cccgtgtgaagcc 722
||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||
Sbjct: 1857 ttaagttgaggctactggcaattctttacaacaatggccacaatttccccgtgagaagcc 1798
Query: 723 tgtkaagactaattcagataccagtctatcacagtatatgaagcagaagaaaggac-atg 781
||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1797 tgtgaagactaattcagataccagtctatcacagtatatgaagcagaagaaaggacaatg 1738
Query: 782 g-aaaacctaaacagttct 799
| |||||||||||||||||
Sbjct: 1737 gaaaaacctaaacagttct 1719
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6151
Number of Sequences: 1807
Number of extensions: 6151
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 2
length of query: 799
length of database: 10,358,551
effective HSP length: 16
effective length of query: 783
effective length of database: 10,329,639
effective search space: 8088107337
effective search space used: 8088107337
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)